Publications

See list of
papers.

These publications introduced Zeffiro Interface, implemented methods that ship with it, or explicitly extend the software. Bibliographic records are taken from CrossRef and the official project references. Each entry links to its DOI and, where available, PubMed or PMC.

Introducing the interface

2019 · Neuroinformatics

Zeffiro User Interface for Electromagnetic Brain Imaging: a GPU Accelerated FEM Tool for Forward and Inverse Computations in Matlab

He, Q., Rezaei, A., & Pursiainen, S.

Neuroinformatics, 18(2), 237–250. doi:10.1007/s12021-019-09436-9

Original publication introducing the Zeffiro Interface code package.

DOI PubMed PMC

Methods implemented in Zeffiro

2020 · Brain Topography

Randomized Multiresolution Scanning in Focal and Fast E/MEG Sensing of Brain Activity with a Variable Depth

Rezaei, A., Koulouri, A., & Pursiainen, S.

Brain Topography, 33(2), 161–175. doi:10.1007/s10548-020-00755-8

RAMUS inverse method implemented in Zeffiro Interface.

DOI

2021 · NeuroImage

Reconstructing subcortical and cortical somatosensory activity via the RAMUS inverse source analysis technique using median nerve SEP data

Rezaei, A., Lahtinen, J., Neugebauer, F., Antonakakis, M., Piastra, M. C., Koulouri, A., Wolters, C. H., & Pursiainen, S.

NeuroImage, 245, 118726. doi:10.1016/j.neuroimage.2021.118726

RAMUS source analysis listed among official Zeffiro Interface references.

DOI

2024 · Clinical Neurophysiology

Standardized hierarchical adaptive Lp regression for noise robust focal epilepsy source reconstructions

Lahtinen, J., Koulouri, A., Rampp, S., Wellmer, J., Wolters, C., & Pursiainen, S.

Clinical Neurophysiology, 159, 24–40. doi:10.1016/j.clinph.2023.12.001

HALpR / SHALpR method implemented as a Zeffiro Interface inverse solver.

DOI

2024 · Clinical Neurophysiology

Standardized Kalman filtering for dynamical source localization of concurrent subcortical and cortical brain activity

Lahtinen, J., Ronni, P., Puthanmadam Subramaniyam, N., Koulouri, A., Wolters, C., & Pursiainen, S.

Clinical Neurophysiology, 168, 15–24. doi:10.1016/j.clinph.2024.09.021

Standardized Kalman lineage implemented in Zeffiro Interface.

DOI

Extensions and applications

2021 · Cognitive Systems Research

An extended application ‘Brain Q’ processing EEG and MEG data of finger stimulation extended from ‘Zeffiro’ based on machine learning and signal processing

He, Q., & Pursiainen, S.

Cognitive Systems Research, 69, 50–66. doi:10.1016/j.cogsys.2020.08.006

Application extended from Zeffiro for EEG/MEG finger-stimulation data.

DOI

Source modeling used by Zeffiro

2019 · NeuroImage

A realistic, accurate and fast source modeling approach for the EEG forward problem

Miinalainen, T., Rezaei, A., Us, D., Nüßing, A., Engwer, C., Wolters, C. H., & Pursiainen, S.

NeuroImage, 184, 56–67. doi:10.1016/j.neuroimage.2018.08.054

H(div) source-modeling technique used by Zeffiro Interface, listed in the official project references.

DOI